Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smn1P97801 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Smn1P97801 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Smn1P97801 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Smn1P97801 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Smn1P97801 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.95□□□□□ -0.34
Smn1P97801 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Mir6982-201ENSMUST00000184354 68 ntBASIC12.95□□□□□ -0.34
Smn1P97801 Gm45328-201ENSMUST00000210942 917 ntBASIC12.95□□□□□ -0.34
Smn1P97801 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC12.95□□□□□ -0.34
Smn1P97801 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12.95□□□□□ -0.34
Smn1P97801 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.95□□□□□ -0.34
Smn1P97801 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Smn1P97801 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Gm15794-201ENSMUST00000120182 631 ntBASIC12.94□□□□□ -0.34
Smn1P97801 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC12.94□□□□□ -0.34
Smn1P97801 Gm19164-201ENSMUST00000210667 640 ntBASIC12.94□□□□□ -0.34
Smn1P97801 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.94□□□□□ -0.34
Smn1P97801 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.94□□□□□ -0.34
Smn1P97801 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Smn1P97801 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Smn1P97801 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.94□□□□□ -0.34
Smn1P97801 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Smn1P97801 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Smn1P97801 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Smn1P97801 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.93□□□□□ -0.34
Smn1P97801 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.93□□□□□ -0.34
Smn1P97801 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Smn1P97801 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smn1P97801 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC12.93□□□□□ -0.34
Smn1P97801 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.93□□□□□ -0.34
Smn1P97801 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smn1P97801 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.93□□□□□ -0.34
Smn1P97801 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.93□□□□□ -0.34
Smn1P97801 Gm17808-201ENSMUST00000200859 894 ntBASIC12.93□□□□□ -0.34
Smn1P97801 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.93□□□□□ -0.34
Smn1P97801 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Gm8258-201ENSMUST00000055593 1449 ntBASIC12.93□□□□□ -0.34
Smn1P97801 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Smn1P97801 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Smn1P97801 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms