Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shox2P70390 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shox2P70390 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shox2P70390 Gm715-201ENSMUST00000117865 831 ntBASIC14.91□□□□□ -0.02
Shox2P70390 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.91□□□□□ -0.02
Shox2P70390 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Shox2P70390 Gm27011-201ENSMUST00000182352 972 ntBASIC14.91□□□□□ -0.02
Shox2P70390 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.91□□□□□ -0.02
Shox2P70390 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shox2P70390 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Shox2P70390 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.91□□□□□ -0.02
Shox2P70390 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.91□□□□□ -0.02
Shox2P70390 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shox2P70390 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shox2P70390 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Shox2P70390 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.91□□□□□ -0.02
Shox2P70390 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shox2P70390 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shox2P70390 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Shox2P70390 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shox2P70390 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Shox2P70390 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.9□□□□□ -0.02
Shox2P70390 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.9□□□□□ -0.02
Shox2P70390 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Shox2P70390 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Shox2P70390 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.9□□□□□ -0.02
Shox2P70390 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Shox2P70390 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Shox2P70390 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Shox2P70390 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.9□□□□□ -0.02
Shox2P70390 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Shox2P70390 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.9□□□□□ -0.02
Shox2P70390 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Shox2P70390 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.89□□□□□ -0.03
Shox2P70390 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Shox2P70390 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Shox2P70390 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.89□□□□□ -0.03
Shox2P70390 Gm2274-201ENSMUST00000184539 609 ntBASIC14.89□□□□□ -0.03
Shox2P70390 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.89□□□□□ -0.03
Shox2P70390 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.89□□□□□ -0.03
Shox2P70390 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Shox2P70390 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Shox2P70390 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Shox2P70390 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Shox2P70390 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Shox2P70390 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.88□□□□□ -0.03
Shox2P70390 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.88□□□□□ -0.03
Shox2P70390 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.88□□□□□ -0.03
Shox2P70390 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Shox2P70390 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms