Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Lsm5P62322 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm5P62322 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Lsm5P62322 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm5P62322 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm5P62322 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm5P62322 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm5P62322 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.6□□□□□ -0.39
Lsm5P62322 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm5P62322 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Lsm5P62322 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.59□□□□□ -0.39
Lsm5P62322 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Lsm5P62322 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Lsm5P62322 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.59□□□□□ -0.39
Lsm5P62322 Gm715-201ENSMUST00000117865 831 ntBASIC12.59□□□□□ -0.39
Lsm5P62322 Gm26039-201ENSMUST00000158152 144 ntBASIC12.59□□□□□ -0.39
Lsm5P62322 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC12.59□□□□□ -0.39
Lsm5P62322 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC12.59□□□□□ -0.39
Lsm5P62322 Gm2274-201ENSMUST00000184539 609 ntBASIC12.59□□□□□ -0.39
Lsm5P62322 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.59□□□□□ -0.39
Lsm5P62322 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.59□□□□□ -0.39
Lsm5P62322 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lsm5P62322 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Lsm5P62322 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Lsm5P62322 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Lsm5P62322 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lsm5P62322 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lsm5P62322 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Lsm5P62322 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.58□□□□□ -0.4
Lsm5P62322 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Gm13337-201ENSMUST00000119183 1594 ntBASIC12.58□□□□□ -0.4
Lsm5P62322 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Lsm5P62322 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 AC135963.1-201ENSMUST00000211640 717 ntBASIC12.58□□□□□ -0.4
Lsm5P62322 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.58□□□□□ -0.4
Lsm5P62322 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.58□□□□□ -0.4
Lsm5P62322 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Lsm5P62322 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Lsm5P62322 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Lsm5P62322 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC12.58□□□□□ -0.4
Lsm5P62322 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
Lsm5P62322 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Lsm5P62322 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Lsm5P62322 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Lsm5P62322 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms