Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SmoP56726 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
SmoP56726 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
SmoP56726 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SmoP56726 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SmoP56726 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SmoP56726 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.13■□□□□ 0.01
SmoP56726 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
SmoP56726 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SmoP56726 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SmoP56726 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SmoP56726 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SmoP56726 Gm26308-201ENSMUST00000157768 69 ntBASIC15.13■□□□□ 0.01
SmoP56726 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SmoP56726 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC15.13■□□□□ 0.01
SmoP56726 CT030684.1-201ENSMUST00000227292 914 ntBASIC15.13■□□□□ 0.01
SmoP56726 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SmoP56726 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SmoP56726 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SmoP56726 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SmoP56726 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SmoP56726 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SmoP56726 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SmoP56726 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
SmoP56726 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SmoP56726 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SmoP56726 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SmoP56726 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SmoP56726 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SmoP56726 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SmoP56726 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.13■□□□□ 0.01
SmoP56726 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.13■□□□□ 0.01
SmoP56726 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SmoP56726 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
SmoP56726 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.12■□□□□ 0.01
SmoP56726 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.12■□□□□ 0.01
SmoP56726 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
SmoP56726 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.12■□□□□ 0.01
SmoP56726 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SmoP56726 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SmoP56726 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SmoP56726 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SmoP56726 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SmoP56726 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SmoP56726 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SmoP56726 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SmoP56726 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.11■□□□□ 0.01
SmoP56726 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.11■□□□□ 0.01
SmoP56726 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SmoP56726 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SmoP56726 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC15.11■□□□□ 0.01
SmoP56726 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SmoP56726 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.11■□□□□ 0.01
SmoP56726 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SmoP56726 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SmoP56726 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SmoP56726 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SmoP56726 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SmoP56726 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SmoP56726 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.11■□□□□ 0.01
SmoP56726 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SmoP56726 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
SmoP56726 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.1■□□□□ 0.01
SmoP56726 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.1■□□□□ 0.01
SmoP56726 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
SmoP56726 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
SmoP56726 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SmoP56726 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SmoP56726 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SmoP56726 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
SmoP56726 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
SmoP56726 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
SmoP56726 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms