Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm10499-201ENSMUST00000174094 934 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm25349-201ENSMUST00000177728 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm23616-201ENSMUST00000177797 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm25871-201ENSMUST00000177816 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm24752-201ENSMUST00000178240 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm24496-201ENSMUST00000178287 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm25649-201ENSMUST00000178476 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm25548-201ENSMUST00000178681 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm23147-201ENSMUST00000178841 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm26095-201ENSMUST00000179270 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm22171-201ENSMUST00000179283 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm23936-201ENSMUST00000179354 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm22619-201ENSMUST00000179516 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm25255-201ENSMUST00000179579 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm24755-201ENSMUST00000179691 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm26506-201ENSMUST00000179692 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm25086-201ENSMUST00000179931 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm23243-201ENSMUST00000180047 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm24659-201ENSMUST00000180212 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm24169-201ENSMUST00000180244 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm23689-201ENSMUST00000180354 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm27359-201ENSMUST00000184153 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm27785-201ENSMUST00000184268 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm27466-201ENSMUST00000184396 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm27703-201ENSMUST00000184836 110 ntBASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.26□□□□□ -0.13
Nkx2-6P43688 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-6P43688 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Nkx2-6P43688 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.25□□□□□ -0.13
Nkx2-6P43688 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Gm9385-201ENSMUST00000117563 472 ntBASIC14.25□□□□□ -0.13
Nkx2-6P43688 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Gm43125-201ENSMUST00000201724 730 ntBASIC14.25□□□□□ -0.13
Nkx2-6P43688 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.25□□□□□ -0.13
Nkx2-6P43688 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.25□□□□□ -0.13
Nkx2-6P43688 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.25□□□□□ -0.13
Nkx2-6P43688 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nkx2-6P43688 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-6P43688 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.24□□□□□ -0.13
Nkx2-6P43688 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-6P43688 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-6P43688 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-6P43688 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Nkx2-6P43688 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nkx2-6P43688 Grk6-207ENSMUST00000225925 2769 ntBASIC14.24□□□□□ -0.13
Nkx2-6P43688 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-6P43688 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-6P43688 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-6P43688 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-6P43688 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-6P43688 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nkx2-6P43688 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Nkx2-6P43688 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms