Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdx2P43241 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdx2P43241 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cdx2P43241 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cdx2P43241 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdx2P43241 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdx2P43241 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdx2P43241 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdx2P43241 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Cdx2P43241 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdx2P43241 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdx2P43241 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cdx2P43241 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cdx2P43241 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Cdx2P43241 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cdx2P43241 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cdx2P43241 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.25□□□□□ -0.13
Cdx2P43241 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Cdx2P43241 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.25□□□□□ -0.13
Cdx2P43241 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cdx2P43241 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdx2P43241 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdx2P43241 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdx2P43241 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.25□□□□□ -0.13
Cdx2P43241 Gm7653-201ENSMUST00000214567 508 ntBASIC14.25□□□□□ -0.13
Cdx2P43241 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cdx2P43241 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Cdx2P43241 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.25□□□□□ -0.13
Cdx2P43241 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Cdx2P43241 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cdx2P43241 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cdx2P43241 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Gm24543-201ENSMUST00000103867 82 ntBASIC14.24□□□□□ -0.13
Cdx2P43241 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdx2P43241 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cdx2P43241 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.24□□□□□ -0.13
Cdx2P43241 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdx2P43241 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cdx2P43241 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdx2P43241 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.24□□□□□ -0.13
Cdx2P43241 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdx2P43241 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.24□□□□□ -0.13
Cdx2P43241 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Cdx2P43241 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx2P43241 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.23□□□□□ -0.13
Cdx2P43241 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Cdx2P43241 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx2P43241 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx2P43241 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Cdx2P43241 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx2P43241 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx2P43241 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Cdx2P43241 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdx2P43241 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx2P43241 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Cdx2P43241 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdx2P43241 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.23□□□□□ -0.13
Cdx2P43241 Gm9719-201ENSMUST00000162765 543 ntBASIC14.23□□□□□ -0.13
Cdx2P43241 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdx2P43241 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdx2P43241 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms