Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
HttP42859 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.83■□□□□ 0.13
HttP42859 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.83■□□□□ 0.13
HttP42859 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HttP42859 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC15.83■□□□□ 0.13
HttP42859 Gm9823-201ENSMUST00000051212 327 ntBASIC15.83■□□□□ 0.13
HttP42859 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HttP42859 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HttP42859 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HttP42859 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
HttP42859 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.83■□□□□ 0.13
HttP42859 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
HttP42859 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
HttP42859 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HttP42859 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HttP42859 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HttP42859 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
HttP42859 Gm4857-201ENSMUST00000192718 785 ntBASIC15.83■□□□□ 0.12
HttP42859 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HttP42859 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HttP42859 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HttP42859 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HttP42859 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.83■□□□□ 0.12
HttP42859 Gm24196-201ENSMUST00000179161 110 ntBASIC15.83■□□□□ 0.12
HttP42859 Gm27243-201ENSMUST00000183964 521 ntBASIC15.83■□□□□ 0.12
HttP42859 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HttP42859 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.83■□□□□ 0.12
HttP42859 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HttP42859 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.83■□□□□ 0.12
HttP42859 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
HttP42859 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HttP42859 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HttP42859 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HttP42859 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HttP42859 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HttP42859 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.82■□□□□ 0.12
HttP42859 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HttP42859 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.82■□□□□ 0.12
HttP42859 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HttP42859 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HttP42859 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HttP42859 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.82■□□□□ 0.12
HttP42859 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HttP42859 Mettl6-204ENSMUST00000227595 1027 ntBASIC15.82■□□□□ 0.12
HttP42859 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HttP42859 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HttP42859 Gm14452-201ENSMUST00000118680 1632 ntBASIC15.81■□□□□ 0.12
HttP42859 Gm42690-201ENSMUST00000197921 1836 ntBASIC15.81■□□□□ 0.12
HttP42859 Gm5279-201ENSMUST00000199575 745 ntBASIC15.81■□□□□ 0.12
HttP42859 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HttP42859 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HttP42859 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HttP42859 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HttP42859 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.81■□□□□ 0.12
HttP42859 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HttP42859 Gm5479-201ENSMUST00000160578 435 ntBASIC15.81■□□□□ 0.12
HttP42859 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.81■□□□□ 0.12
HttP42859 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.81■□□□□ 0.12
HttP42859 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HttP42859 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HttP42859 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HttP42859 Gm8652-201ENSMUST00000181363 964 ntBASIC15.81■□□□□ 0.12
HttP42859 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.81■□□□□ 0.12
HttP42859 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HttP42859 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HttP42859 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HttP42859 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HttP42859 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HttP42859 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.8■□□□□ 0.12
HttP42859 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.8■□□□□ 0.12
HttP42859 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.8■□□□□ 0.12
HttP42859 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.8■□□□□ 0.12
HttP42859 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.8■□□□□ 0.12
HttP42859 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.8■□□□□ 0.12
HttP42859 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HttP42859 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HttP42859 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.79■□□□□ 0.12
HttP42859 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.79■□□□□ 0.12
HttP42859 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HttP42859 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
HttP42859 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms