Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Timp3P39876 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.38□□□□□ -0.43
Timp3P39876 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC12.38□□□□□ -0.43
Timp3P39876 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Timp3P39876 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.38□□□□□ -0.43
Timp3P39876 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.38□□□□□ -0.43
Timp3P39876 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.38□□□□□ -0.43
Timp3P39876 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.38□□□□□ -0.43
Timp3P39876 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Timp3P39876 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Timp3P39876 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Timp3P39876 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Timp3P39876 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.37□□□□□ -0.43
Timp3P39876 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.37□□□□□ -0.43
Timp3P39876 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.37□□□□□ -0.43
Timp3P39876 Gm9682-201ENSMUST00000197505 556 ntBASIC12.37□□□□□ -0.43
Timp3P39876 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.37□□□□□ -0.43
Timp3P39876 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Timp3P39876 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.37□□□□□ -0.43
Timp3P39876 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.37□□□□□ -0.43
Timp3P39876 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Timp3P39876 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.37□□□□□ -0.43
Timp3P39876 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.37□□□□□ -0.43
Timp3P39876 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.37□□□□□ -0.43
Timp3P39876 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Timp3P39876 Rbfox2-206ENSMUST00000227314 1810 ntBASIC12.37□□□□□ -0.43
Timp3P39876 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Timp3P39876 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC12.37□□□□□ -0.43
Timp3P39876 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Timp3P39876 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.36□□□□□ -0.43
Timp3P39876 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.36□□□□□ -0.43
Timp3P39876 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.36□□□□□ -0.43
Timp3P39876 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Gm4899-201ENSMUST00000178708 719 ntBASIC12.36□□□□□ -0.43
Timp3P39876 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Timp3P39876 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.36□□□□□ -0.43
Timp3P39876 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Timp3P39876 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Timp3P39876 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms