Protein–RNA interactions for Protein: P23611

Irf8, Interferon regulatory factor 8, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf8P23611 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Irf8P23611 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Irf8P23611 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.24■□□□□ 0.19
Irf8P23611 Gm15467-201ENSMUST00000120582 445 ntBASIC16.24■□□□□ 0.19
Irf8P23611 Gm27301-201ENSMUST00000184012 127 ntBASIC16.24■□□□□ 0.19
Irf8P23611 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.24■□□□□ 0.19
Irf8P23611 Gm45747-201ENSMUST00000212203 999 ntBASIC16.24■□□□□ 0.19
Irf8P23611 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Irf8P23611 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Irf8P23611 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.24■□□□□ 0.19
Irf8P23611 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Irf8P23611 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Irf8P23611 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Irf8P23611 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Irf8P23611 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.24■□□□□ 0.19
Irf8P23611 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Irf8P23611 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Irf8P23611 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.24■□□□□ 0.19
Irf8P23611 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Irf8P23611 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Irf8P23611 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Irf8P23611 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Irf8P23611 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Irf8P23611 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.23■□□□□ 0.19
Irf8P23611 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC16.23■□□□□ 0.19
Irf8P23611 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Mir3113-201ENSMUST00000175478 76 ntBASIC16.23■□□□□ 0.19
Irf8P23611 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.23■□□□□ 0.19
Irf8P23611 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.23■□□□□ 0.19
Irf8P23611 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.23■□□□□ 0.19
Irf8P23611 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.23■□□□□ 0.19
Irf8P23611 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC16.23■□□□□ 0.19
Irf8P23611 Gm10154-201ENSMUST00000084445 354 ntBASIC16.23■□□□□ 0.19
Irf8P23611 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Irf8P23611 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Irf8P23611 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Irf8P23611 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.22■□□□□ 0.19
Irf8P23611 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Irf8P23611 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Irf8P23611 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Irf8P23611 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Irf8P23611 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Irf8P23611 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Irf8P23611 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Irf8P23611 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Irf8P23611 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Irf8P23611 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Irf8P23611 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Irf8P23611 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Irf8P23611 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Irf8P23611 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Irf8P23611 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Irf8P23611 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Irf8P23611 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.21■□□□□ 0.19
Irf8P23611 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
Irf8P23611 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.21■□□□□ 0.19
Irf8P23611 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Irf8P23611 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Irf8P23611 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Irf8P23611 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.21■□□□□ 0.19
Irf8P23611 Gm16026-204ENSMUST00000162652 683 ntBASIC16.21■□□□□ 0.19
Irf8P23611 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Irf8P23611 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.21■□□□□ 0.19
Irf8P23611 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms