Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ApoeP08226 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ApoeP08226 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Carlr-201ENSMUST00000181515 2574 ntBASIC14.28□□□□□ -0.12
ApoeP08226 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ApoeP08226 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ApoeP08226 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ApoeP08226 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.27□□□□□ -0.12
ApoeP08226 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ApoeP08226 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ApoeP08226 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ApoeP08226 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
ApoeP08226 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ApoeP08226 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ApoeP08226 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.27□□□□□ -0.12
ApoeP08226 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ApoeP08226 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ApoeP08226 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ApoeP08226 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.27□□□□□ -0.12
ApoeP08226 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.27□□□□□ -0.13
ApoeP08226 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.27□□□□□ -0.13
ApoeP08226 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ApoeP08226 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ApoeP08226 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.27□□□□□ -0.13
ApoeP08226 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.27□□□□□ -0.13
ApoeP08226 Gm45328-201ENSMUST00000210942 917 ntBASIC14.27□□□□□ -0.13
ApoeP08226 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ApoeP08226 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ApoeP08226 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ApoeP08226 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ApoeP08226 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ApoeP08226 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ApoeP08226 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ApoeP08226 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ApoeP08226 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ApoeP08226 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ApoeP08226 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ApoeP08226 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ApoeP08226 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ApoeP08226 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ApoeP08226 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ApoeP08226 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.26□□□□□ -0.13
ApoeP08226 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ApoeP08226 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
ApoeP08226 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ApoeP08226 Gm8344-201ENSMUST00000119813 856 ntBASIC14.26□□□□□ -0.13
ApoeP08226 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Gm5587-201ENSMUST00000206270 674 ntBASIC14.26□□□□□ -0.13
ApoeP08226 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC14.26□□□□□ -0.13
ApoeP08226 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ApoeP08226 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
ApoeP08226 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ApoeP08226 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.25□□□□□ -0.13
ApoeP08226 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
ApoeP08226 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
ApoeP08226 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
ApoeP08226 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
ApoeP08226 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.25□□□□□ -0.13
ApoeP08226 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms