Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.85□□□□□ -0.19
Col4a2P08122 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col4a2P08122 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Gm14042-201ENSMUST00000120139 833 ntBASIC13.85□□□□□ -0.19
Col4a2P08122 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.85□□□□□ -0.19
Col4a2P08122 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.85□□□□□ -0.19
Col4a2P08122 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Col4a2P08122 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.85□□□□□ -0.19
Col4a2P08122 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC13.85□□□□□ -0.19
Col4a2P08122 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col4a2P08122 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col4a2P08122 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.84□□□□□ -0.19
Col4a2P08122 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a2P08122 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a2P08122 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col4a2P08122 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Col4a2P08122 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col4a2P08122 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.84□□□□□ -0.19
Col4a2P08122 Shd-206ENSMUST00000225145 998 ntBASIC13.84□□□□□ -0.19
Col4a2P08122 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a2P08122 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col4a2P08122 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a2P08122 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a2P08122 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a2P08122 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.84□□□□□ -0.19
Col4a2P08122 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col4a2P08122 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a2P08122 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a2P08122 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a2P08122 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.84□□□□□ -0.19
Col4a2P08122 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a2P08122 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.84□□□□□ -0.19
Col4a2P08122 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.84□□□□□ -0.19
Col4a2P08122 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col4a2P08122 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a2P08122 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.84□□□□□ -0.19
Col4a2P08122 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a2P08122 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a2P08122 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.84□□□□□ -0.19
Col4a2P08122 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col4a2P08122 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col4a2P08122 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col4a2P08122 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col4a2P08122 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col4a2P08122 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a2P08122 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Col4a2P08122 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a2P08122 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Col4a2P08122 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.83□□□□□ -0.2
Col4a2P08122 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a2P08122 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a2P08122 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a2P08122 Gm43433-201ENSMUST00000196573 481 ntBASIC13.83□□□□□ -0.2
Col4a2P08122 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a2P08122 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.83□□□□□ -0.2
Col4a2P08122 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.83□□□□□ -0.2
Col4a2P08122 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.83□□□□□ -0.2
Col4a2P08122 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a2P08122 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a2P08122 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.83□□□□□ -0.2
Col4a2P08122 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a2P08122 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a2P08122 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.83□□□□□ -0.2
Col4a2P08122 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.83□□□□□ -0.2
Col4a2P08122 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Col4a2P08122 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col4a2P08122 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a2P08122 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a2P08122 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a2P08122 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a2P08122 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col4a2P08122 Gm6222-201ENSMUST00000120787 396 ntBASIC13.82□□□□□ -0.2
Col4a2P08122 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a2P08122 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a2P08122 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a2P08122 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a2P08122 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.82□□□□□ -0.2
Col4a2P08122 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.82□□□□□ -0.2
Col4a2P08122 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.82□□□□□ -0.2
Col4a2P08122 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a2P08122 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.82□□□□□ -0.2
Col4a2P08122 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col4a2P08122 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms