Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.95■□□□□ 0.46
Smarce1O54941 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Smarce1O54941 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Smarce1O54941 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Smarce1O54941 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Smarce1O54941 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Gm14859-201ENSMUST00000117752 357 ntBASIC17.94■□□□□ 0.46
Smarce1O54941 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.94■□□□□ 0.46
Smarce1O54941 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.94■□□□□ 0.46
Smarce1O54941 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.94■□□□□ 0.46
Smarce1O54941 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Smarce1O54941 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.94■□□□□ 0.46
Smarce1O54941 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Smarce1O54941 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC17.93■□□□□ 0.46
Smarce1O54941 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarce1O54941 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarce1O54941 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smarce1O54941 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.93■□□□□ 0.46
Smarce1O54941 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarce1O54941 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Smarce1O54941 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarce1O54941 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.93■□□□□ 0.46
Smarce1O54941 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarce1O54941 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarce1O54941 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarce1O54941 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Smarce1O54941 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarce1O54941 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarce1O54941 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarce1O54941 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Smarce1O54941 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarce1O54941 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Smarce1O54941 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarce1O54941 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Smarce1O54941 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarce1O54941 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarce1O54941 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Smarce1O54941 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.92■□□□□ 0.46
Smarce1O54941 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.92■□□□□ 0.46
Smarce1O54941 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC17.92■□□□□ 0.46
Smarce1O54941 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarce1O54941 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarce1O54941 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarce1O54941 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarce1O54941 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Smarce1O54941 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Smarce1O54941 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Smarce1O54941 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.92■□□□□ 0.46
Smarce1O54941 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Smarce1O54941 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarce1O54941 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarce1O54941 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarce1O54941 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Smarce1O54941 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarce1O54941 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarce1O54941 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarce1O54941 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarce1O54941 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarce1O54941 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarce1O54941 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarce1O54941 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.91■□□□□ 0.46
Smarce1O54941 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.91■□□□□ 0.46
Smarce1O54941 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Smarce1O54941 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarce1O54941 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Smarce1O54941 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Smarce1O54941 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.9■□□□□ 0.46
Smarce1O54941 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Smarce1O54941 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Smarce1O54941 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Smarce1O54941 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms