Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
Capn1O35350 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.99□□□□□ -0.17
Capn1O35350 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Capn1O35350 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Capn1O35350 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Capn1O35350 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Capn1O35350 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.98□□□□□ -0.17
Capn1O35350 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Capn1O35350 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Capn1O35350 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Capn1O35350 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.98□□□□□ -0.17
Capn1O35350 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Capn1O35350 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Capn1O35350 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Capn1O35350 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Gm9682-201ENSMUST00000197505 556 ntBASIC13.98□□□□□ -0.17
Capn1O35350 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.98□□□□□ -0.17
Capn1O35350 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Capn1O35350 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.98□□□□□ -0.17
Capn1O35350 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.98□□□□□ -0.17
Capn1O35350 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Capn1O35350 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.98□□□□□ -0.17
Capn1O35350 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Capn1O35350 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.97□□□□□ -0.17
Capn1O35350 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.97□□□□□ -0.17
Capn1O35350 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
Capn1O35350 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.97□□□□□ -0.17
Capn1O35350 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Capn1O35350 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.97□□□□□ -0.17
Capn1O35350 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.97□□□□□ -0.17
Capn1O35350 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Capn1O35350 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Capn1O35350 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Capn1O35350 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Capn1O35350 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Capn1O35350 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms