Protein–RNA interactions for Protein: O35114

Scarb2, Lysosome membrane protein 2, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2O35114 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Scarb2O35114 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb2O35114 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.09□□□□□ -0.15
Scarb2O35114 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb2O35114 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb2O35114 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb2O35114 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.09□□□□□ -0.15
Scarb2O35114 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb2O35114 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.09□□□□□ -0.15
Scarb2O35114 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.09□□□□□ -0.15
Scarb2O35114 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb2O35114 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb2O35114 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.09□□□□□ -0.15
Scarb2O35114 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.09□□□□□ -0.15
Scarb2O35114 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.09□□□□□ -0.15
Scarb2O35114 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.09□□□□□ -0.15
Scarb2O35114 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb2O35114 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb2O35114 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Scarb2O35114 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb2O35114 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Scarb2O35114 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Scarb2O35114 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb2O35114 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.09□□□□□ -0.15
Scarb2O35114 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.09□□□□□ -0.15
Scarb2O35114 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb2O35114 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Scarb2O35114 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.09□□□□□ -0.15
Scarb2O35114 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC14.09□□□□□ -0.15
Scarb2O35114 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Scarb2O35114 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Scarb2O35114 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scarb2O35114 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scarb2O35114 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scarb2O35114 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Scarb2O35114 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb2O35114 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb2O35114 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb2O35114 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb2O35114 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb2O35114 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb2O35114 Gm25990-201ENSMUST00000102440 86 ntBASIC14.08□□□□□ -0.16
Scarb2O35114 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb2O35114 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.08□□□□□ -0.16
Scarb2O35114 Gm6089-201ENSMUST00000197666 938 ntBASIC14.08□□□□□ -0.16
Scarb2O35114 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.08□□□□□ -0.16
Scarb2O35114 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.08□□□□□ -0.16
Scarb2O35114 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb2O35114 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb2O35114 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb2O35114 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Scarb2O35114 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb2O35114 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb2O35114 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb2O35114 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Scarb2O35114 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Scarb2O35114 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.07□□□□□ -0.16
Scarb2O35114 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Scarb2O35114 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Scarb2O35114 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Scarb2O35114 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.07□□□□□ -0.16
Scarb2O35114 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Scarb2O35114 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scarb2O35114 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.07□□□□□ -0.16
Scarb2O35114 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.07□□□□□ -0.16
Scarb2O35114 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.07□□□□□ -0.16
Scarb2O35114 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.07□□□□□ -0.16
Scarb2O35114 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Gm10459-201ENSMUST00000202708 1155 ntBASIC14.07□□□□□ -0.16
Scarb2O35114 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.07□□□□□ -0.16
Scarb2O35114 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.07□□□□□ -0.16
Scarb2O35114 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.07□□□□□ -0.16
Scarb2O35114 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Scarb2O35114 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Scarb2O35114 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb2O35114 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb2O35114 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb2O35114 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb2O35114 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb2O35114 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Scarb2O35114 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms