Protein–RNA interactions for Protein: O09039

Sh2b3, SH2B adapter protein 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2b3O09039 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.43□□□□□ -0.26
Sh2b3O09039 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Sh2b3O09039 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sh2b3O09039 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
Sh2b3O09039 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sh2b3O09039 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.42□□□□□ -0.26
Sh2b3O09039 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.42□□□□□ -0.26
Sh2b3O09039 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.42□□□□□ -0.26
Sh2b3O09039 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Sh2b3O09039 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.42□□□□□ -0.26
Sh2b3O09039 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.42□□□□□ -0.26
Sh2b3O09039 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13.42□□□□□ -0.26
Sh2b3O09039 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Sh2b3O09039 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Sh2b3O09039 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sh2b3O09039 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Sh2b3O09039 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sh2b3O09039 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.41□□□□□ -0.26
Sh2b3O09039 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.41□□□□□ -0.26
Sh2b3O09039 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Sh2b3O09039 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sh2b3O09039 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.41□□□□□ -0.26
Sh2b3O09039 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.41□□□□□ -0.26
Sh2b3O09039 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.41□□□□□ -0.26
Sh2b3O09039 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sh2b3O09039 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sh2b3O09039 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Sh2b3O09039 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.41□□□□□ -0.26
Sh2b3O09039 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sh2b3O09039 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2b3O09039 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2b3O09039 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2b3O09039 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2b3O09039 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2b3O09039 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2b3O09039 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2b3O09039 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2b3O09039 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2b3O09039 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13.4□□□□□ -0.26
Sh2b3O09039 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2b3O09039 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2b3O09039 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Sh2b3O09039 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.4□□□□□ -0.26
Sh2b3O09039 Gm18489-201ENSMUST00000172565 551 ntBASIC13.4□□□□□ -0.26
Sh2b3O09039 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.4□□□□□ -0.26
Sh2b3O09039 Gm9682-201ENSMUST00000197505 556 ntBASIC13.4□□□□□ -0.26
Sh2b3O09039 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.4□□□□□ -0.26
Sh2b3O09039 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Sh2b3O09039 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sh2b3O09039 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms