Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shisa8J3QNX5 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.77□□□□□ -0.2
Shisa8J3QNX5 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Shisa8J3QNX5 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Shisa8J3QNX5 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Shisa8J3QNX5 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.77□□□□□ -0.2
Shisa8J3QNX5 Gm10013-201ENSMUST00000106074 672 ntBASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Shisa8J3QNX5 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shisa8J3QNX5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
Shisa8J3QNX5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms