Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC18.09■□□□□ 0.49
NpcdF8VQB8 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NpcdF8VQB8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NpcdF8VQB8 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NpcdF8VQB8 Gm8602-201ENSMUST00000184045 607 ntBASIC18.09■□□□□ 0.49
NpcdF8VQB8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC18.09■□□□□ 0.49
NpcdF8VQB8 Gm43630-201ENSMUST00000201550 776 ntBASIC18.09■□□□□ 0.49
NpcdF8VQB8 Gm6007-201ENSMUST00000208170 823 ntBASIC18.09■□□□□ 0.49
NpcdF8VQB8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC18.09■□□□□ 0.49
NpcdF8VQB8 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NpcdF8VQB8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NpcdF8VQB8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NpcdF8VQB8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.09■□□□□ 0.49
NpcdF8VQB8 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NpcdF8VQB8 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NpcdF8VQB8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NpcdF8VQB8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NpcdF8VQB8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NpcdF8VQB8 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.08■□□□□ 0.49
NpcdF8VQB8 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
NpcdF8VQB8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
NpcdF8VQB8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NpcdF8VQB8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
NpcdF8VQB8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NpcdF8VQB8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.08■□□□□ 0.49
NpcdF8VQB8 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NpcdF8VQB8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
NpcdF8VQB8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
NpcdF8VQB8 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NpcdF8VQB8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NpcdF8VQB8 Gm14722-201ENSMUST00000118943 689 ntBASIC18.08■□□□□ 0.48
NpcdF8VQB8 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC18.08■□□□□ 0.48
NpcdF8VQB8 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NpcdF8VQB8 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC18.08■□□□□ 0.48
NpcdF8VQB8 Rassf8-202ENSMUST00000058538 1131 ntBASIC18.08■□□□□ 0.48
NpcdF8VQB8 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NpcdF8VQB8 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
NpcdF8VQB8 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NpcdF8VQB8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
NpcdF8VQB8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NpcdF8VQB8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NpcdF8VQB8 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
NpcdF8VQB8 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.08■□□□□ 0.48
NpcdF8VQB8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NpcdF8VQB8 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.07■□□□□ 0.48
NpcdF8VQB8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NpcdF8VQB8 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.07■□□□□ 0.48
NpcdF8VQB8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NpcdF8VQB8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NpcdF8VQB8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Gm15824-201ENSMUST00000119516 955 ntBASIC18.06■□□□□ 0.48
NpcdF8VQB8 Gm10499-201ENSMUST00000174094 934 ntBASIC18.06■□□□□ 0.48
NpcdF8VQB8 Gm29667-201ENSMUST00000190817 490 ntBASIC18.06■□□□□ 0.48
NpcdF8VQB8 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NpcdF8VQB8 AC238811.1-201ENSMUST00000225302 441 ntBASIC18.06■□□□□ 0.48
NpcdF8VQB8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Asic1-205ENSMUST00000228185 1818 ntBASIC18.06■□□□□ 0.48
NpcdF8VQB8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NpcdF8VQB8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NpcdF8VQB8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms