Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Srp54bE9PXC0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Gm6973-201ENSMUST00000117080 721 ntBASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Gm14057-201ENSMUST00000120631 482 ntBASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Gm7774-201ENSMUST00000200064 533 ntBASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 App-207ENSMUST00000227737 2827 ntBASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Srp54bE9PXC0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm22065-201ENSMUST00000103753 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm22066-201ENSMUST00000103761 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm24932-201ENSMUST00000103763 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm24115-201ENSMUST00000103799 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm22190-201ENSMUST00000103827 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm22191-201ENSMUST00000103831 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm24721-201ENSMUST00000103849 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm28018-201ENSMUST00000103869 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm26399-201ENSMUST00000103937 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm24158-201ENSMUST00000175263 71 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm25349-201ENSMUST00000177728 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm23616-201ENSMUST00000177797 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm25871-201ENSMUST00000177816 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm24752-201ENSMUST00000178240 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm24496-201ENSMUST00000178287 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm25649-201ENSMUST00000178476 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm25548-201ENSMUST00000178681 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm23147-201ENSMUST00000178841 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm26095-201ENSMUST00000179270 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm22171-201ENSMUST00000179283 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm23936-201ENSMUST00000179354 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm22619-201ENSMUST00000179516 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm25255-201ENSMUST00000179579 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm24755-201ENSMUST00000179691 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm26506-201ENSMUST00000179692 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm25086-201ENSMUST00000179931 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm23243-201ENSMUST00000180047 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm24659-201ENSMUST00000180212 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm24169-201ENSMUST00000180244 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm23689-201ENSMUST00000180354 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm27359-201ENSMUST00000184153 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm27785-201ENSMUST00000184268 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm27466-201ENSMUST00000184396 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm27703-201ENSMUST00000184836 110 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Gm10253-201ENSMUST00000194270 940 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.81□□□□□ -0.04
Srp54bE9PXC0 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Srp54bE9PXC0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms