Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Gm25745-201ENSMUST00000174945 133 ntBASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Gm28043E0CXC2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Gm28043E0CXC2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Gm12644-201ENSMUST00000119935 606 ntBASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Gm28043E0CXC2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm28043E0CXC2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms