Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hfm1D3Z4R1 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC20.89■□□□□ 0.93
Hfm1D3Z4R1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC20.89■□□□□ 0.93
Hfm1D3Z4R1 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Hfm1D3Z4R1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hfm1D3Z4R1 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Gm11425-201ENSMUST00000119608 498 ntBASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Gm9396-201ENSMUST00000076703 567 ntBASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Hfm1D3Z4R1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Gm5354-201ENSMUST00000182417 973 ntBASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 AC121804.3-201ENSMUST00000223420 295 ntBASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 AC139580.1-202ENSMUST00000223574 928 ntBASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hfm1D3Z4R1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hfm1D3Z4R1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hfm1D3Z4R1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hfm1D3Z4R1 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hfm1D3Z4R1 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hfm1D3Z4R1 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Hfm1D3Z4R1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hfm1D3Z4R1 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Hfm1D3Z4R1 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hfm1D3Z4R1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hfm1D3Z4R1 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Hfm1D3Z4R1 Trav13-3-201ENSMUST00000117226 336 ntBASIC20.86■□□□□ 0.93
Hfm1D3Z4R1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC20.86■□□□□ 0.93
Hfm1D3Z4R1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Hfm1D3Z4R1 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hfm1D3Z4R1 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.86■□□□□ 0.93
Hfm1D3Z4R1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 Gm12585-201ENSMUST00000117307 290 ntBASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 Gm12341-201ENSMUST00000119724 503 ntBASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 Gm6916-202ENSMUST00000205523 195 ntBASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 AC155252.1-201ENSMUST00000226462 1208 ntBASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 Gm5049-201ENSMUST00000195878 1590 ntBASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hfm1D3Z4R1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Hfm1D3Z4R1 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms