Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
Krt28A6BLY7 Gm28265-201ENSMUST00000188201 2319 ntBASIC16.64■□□□□ 0.25
Krt28A6BLY7 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.64■□□□□ 0.25
Krt28A6BLY7 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Krt28A6BLY7 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Krt28A6BLY7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Krt28A6BLY7 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Krt28A6BLY7 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC16.64■□□□□ 0.25
Krt28A6BLY7 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Gm11918-201ENSMUST00000121660 179 ntBASIC16.63■□□□□ 0.25
Krt28A6BLY7 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.63■□□□□ 0.25
Krt28A6BLY7 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.63■□□□□ 0.25
Krt28A6BLY7 Gm43703-201ENSMUST00000200523 763 ntBASIC16.63■□□□□ 0.25
Krt28A6BLY7 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Krt28A6BLY7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Gm13216-201ENSMUST00000117145 591 ntBASIC16.62■□□□□ 0.25
Krt28A6BLY7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Gm9522-201ENSMUST00000182394 926 ntBASIC16.62■□□□□ 0.25
Krt28A6BLY7 Gm6007-201ENSMUST00000208170 823 ntBASIC16.62■□□□□ 0.25
Krt28A6BLY7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.62■□□□□ 0.25
Krt28A6BLY7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt28A6BLY7 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Krt28A6BLY7 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Gm43630-201ENSMUST00000201550 776 ntBASIC16.61■□□□□ 0.25
Krt28A6BLY7 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.61■□□□□ 0.25
Krt28A6BLY7 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Krt28A6BLY7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt28A6BLY7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt28A6BLY7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt28A6BLY7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt28A6BLY7 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Krt28A6BLY7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt28A6BLY7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Krt28A6BLY7 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Krt28A6BLY7 Gm5479-201ENSMUST00000160578 435 ntBASIC16.6■□□□□ 0.25
Krt28A6BLY7 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC16.6■□□□□ 0.25
Krt28A6BLY7 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms