Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.72□□□□□ -0.37
Col6a4A2AX52 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC12.72□□□□□ -0.37
Col6a4A2AX52 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a4A2AX52 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a4A2AX52 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.71□□□□□ -0.37
Col6a4A2AX52 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a4A2AX52 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a4A2AX52 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a4A2AX52 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a4A2AX52 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.71□□□□□ -0.37
Col6a4A2AX52 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.71□□□□□ -0.37
Col6a4A2AX52 Gm43630-201ENSMUST00000201550 776 ntBASIC12.71□□□□□ -0.37
Col6a4A2AX52 Gm6888-201ENSMUST00000221983 706 ntBASIC12.71□□□□□ -0.37
Col6a4A2AX52 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a4A2AX52 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.71□□□□□ -0.37
Col6a4A2AX52 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a4A2AX52 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a4A2AX52 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a4A2AX52 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a4A2AX52 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.71□□□□□ -0.37
Col6a4A2AX52 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a4A2AX52 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Col6a4A2AX52 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a4A2AX52 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a4A2AX52 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a4A2AX52 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Col6a4A2AX52 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a4A2AX52 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a4A2AX52 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a4A2AX52 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC12.71□□□□□ -0.38
Col6a4A2AX52 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a4A2AX52 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Col6a4A2AX52 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Col6a4A2AX52 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.7□□□□□ -0.38
Col6a4A2AX52 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.7□□□□□ -0.38
Col6a4A2AX52 Syt7-205ENSMUST00000224135 1557 ntBASIC12.7□□□□□ -0.38
Col6a4A2AX52 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Gm28631-201ENSMUST00000190740 334 ntBASIC12.7□□□□□ -0.38
Col6a4A2AX52 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.7□□□□□ -0.38
Col6a4A2AX52 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.7□□□□□ -0.38
Col6a4A2AX52 Gm27920-201ENSMUST00000183953 96 ntBASIC12.7□□□□□ -0.38
Col6a4A2AX52 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Col6a4A2AX52 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.69□□□□□ -0.38
Col6a4A2AX52 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms