Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
IsxA1A546 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IsxA1A546 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IsxA1A546 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.06□□□□□ -0.16
IsxA1A546 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
IsxA1A546 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
IsxA1A546 Mir5130-201ENSMUST00000175160 84 ntBASIC14.06□□□□□ -0.16
IsxA1A546 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC14.06□□□□□ -0.16
IsxA1A546 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IsxA1A546 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IsxA1A546 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IsxA1A546 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
IsxA1A546 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
IsxA1A546 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
IsxA1A546 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
IsxA1A546 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
IsxA1A546 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
IsxA1A546 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IsxA1A546 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
IsxA1A546 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IsxA1A546 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
IsxA1A546 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IsxA1A546 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
IsxA1A546 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.05□□□□□ -0.16
IsxA1A546 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IsxA1A546 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IsxA1A546 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IsxA1A546 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.05□□□□□ -0.16
IsxA1A546 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
IsxA1A546 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IsxA1A546 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC14.05□□□□□ -0.16
IsxA1A546 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.05□□□□□ -0.16
IsxA1A546 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.05□□□□□ -0.16
IsxA1A546 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
IsxA1A546 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
IsxA1A546 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
IsxA1A546 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IsxA1A546 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IsxA1A546 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.05□□□□□ -0.16
IsxA1A546 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IsxA1A546 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
IsxA1A546 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
IsxA1A546 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.04□□□□□ -0.16
IsxA1A546 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
IsxA1A546 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.04□□□□□ -0.16
IsxA1A546 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
IsxA1A546 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.04□□□□□ -0.16
IsxA1A546 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.04□□□□□ -0.16
IsxA1A546 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.04□□□□□ -0.16
IsxA1A546 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.04□□□□□ -0.16
IsxA1A546 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
IsxA1A546 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
IsxA1A546 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.03□□□□□ -0.16
IsxA1A546 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
IsxA1A546 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.03□□□□□ -0.16
IsxA1A546 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
IsxA1A546 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
IsxA1A546 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
IsxA1A546 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
IsxA1A546 Gm13474-201ENSMUST00000122466 815 ntBASIC14.03□□□□□ -0.16
IsxA1A546 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
IsxA1A546 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
IsxA1A546 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
IsxA1A546 Gm18101-201ENSMUST00000215769 548 ntBASIC14.03□□□□□ -0.16
IsxA1A546 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.03□□□□□ -0.16
IsxA1A546 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
IsxA1A546 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
IsxA1A546 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms