Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6d-7A0A075B6B0 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm43514-201ENSMUST00000198852 424 ntBASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 AC161829.1-201ENSMUST00000220298 281 ntBASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6d-7A0A075B6B0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Trav6d-7A0A075B6B0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav6d-7A0A075B6B0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms