Protein–RNA interactions for Protein: A0A075B647

Trav9-2, T cell receptor alpha variable 9-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-2A0A075B647 Gm5049-201ENSMUST00000195878 1590 ntBASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav9-2A0A075B647 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav9-2A0A075B647 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav9-2A0A075B647 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms