Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Trav9-1A0A075B601 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav9-1A0A075B601 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 AC160338.1-201ENSMUST00000214232 705 ntBASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav9-1A0A075B601 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-1A0A075B601 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-1A0A075B601 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-1A0A075B601 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Trav9-1A0A075B601 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-1A0A075B601 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-1A0A075B601 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav9-1A0A075B601 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC11.77□□□□□ -0.52
Trav9-1A0A075B601 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Gm15358-201ENSMUST00000119249 520 ntBASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav9-1A0A075B601 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms