Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm10313-201ENSMUST00000095320 1002 ntBASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav6-1A0A075B5Z8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm4459-201ENSMUST00000118750 468 ntBASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm15358-201ENSMUST00000119249 520 ntBASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm25745-201ENSMUST00000174945 133 ntBASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm5837-201ENSMUST00000191844 1369 ntBASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Carlr-201ENSMUST00000181515 2574 ntBASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav6-1A0A075B5Z8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Spcs1-207ENSMUST00000228767 1008 ntBASIC12.11□□□□□ -0.47
Trav6-1A0A075B5Z8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms