Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
H2afb3S4R1G7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 AC158538.1-201ENSMUST00000225870 294 ntBASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
H2afb3S4R1G7 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Gm12895-201ENSMUST00000122214 226 ntBASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Grk6-207ENSMUST00000225925 2769 ntBASIC13.6□□□□□ -0.23
H2afb3S4R1G7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
H2afb3S4R1G7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
H2afb3S4R1G7 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms