Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Clcf1Q9QZM3 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Clcf1Q9QZM3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clcf1Q9QZM3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Clcf1Q9QZM3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.74□□□□□ -0.21
Clcf1Q9QZM3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clcf1Q9QZM3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Clcf1Q9QZM3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Gm14494-201ENSMUST00000118786 435 ntBASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Gm11594-201ENSMUST00000122313 162 ntBASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Gm4899-201ENSMUST00000178708 719 ntBASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 AC147366.1-201ENSMUST00000227671 852 ntBASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Clcf1Q9QZM3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Gm7787-201ENSMUST00000216858 688 ntBASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clcf1Q9QZM3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.71□□□□□ -0.21
Clcf1Q9QZM3 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 201.3 ms