Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr2e3Q9QXZ7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr2e3Q9QXZ7 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC17.07■□□□□ 0.32
Nr2e3Q9QXZ7 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Nr2e3Q9QXZ7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Nr2e3Q9QXZ7 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr2e3Q9QXZ7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr2e3Q9QXZ7 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Nr2e3Q9QXZ7 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Nr2e3Q9QXZ7 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Gm8000-201ENSMUST00000188378 592 ntBASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Gm45747-201ENSMUST00000212203 999 ntBASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 CT010506.4-201ENSMUST00000225457 351 ntBASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Nr2e3Q9QXZ7 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Nr2e3Q9QXZ7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Mir3113-201ENSMUST00000175478 76 ntBASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Mir8117-201ENSMUST00000184773 107 ntBASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Nr2e3Q9QXZ7 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms