Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Gm4459-201ENSMUST00000118750 468 ntBASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Gm18622-201ENSMUST00000219361 595 ntBASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Chaf1aQ9QWF0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chaf1aQ9QWF0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chaf1aQ9QWF0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chaf1aQ9QWF0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1aQ9QWF0 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1aQ9QWF0 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1aQ9QWF0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1aQ9QWF0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1aQ9QWF0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Chaf1aQ9QWF0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.91■□□□□ 0.3
Chaf1aQ9QWF0 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1aQ9QWF0 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1aQ9QWF0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.91■□□□□ 0.3
Chaf1aQ9QWF0 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.91■□□□□ 0.3
Chaf1aQ9QWF0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.91■□□□□ 0.3
Chaf1aQ9QWF0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Chaf1aQ9QWF0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1aQ9QWF0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Chaf1aQ9QWF0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms