Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rhox4bQ9JI43 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rhox4bQ9JI43 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rhox4bQ9JI43 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rhox4bQ9JI43 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rhox4bQ9JI43 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Rhox4bQ9JI43 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rhox4bQ9JI43 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rhox4bQ9JI43 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rhox4bQ9JI43 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rhox4bQ9JI43 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rhox4bQ9JI43 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rhox4bQ9JI43 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rhox4bQ9JI43 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Rhox4bQ9JI43 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rhox4bQ9JI43 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Gm27463-201ENSMUST00000183569 57 ntBASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Odf3b-204ENSMUST00000227834 930 ntBASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rhox4bQ9JI43 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Mir1199-201ENSMUST00000117015 119 ntBASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Gm12134-201ENSMUST00000122109 520 ntBASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Otx2os1-204ENSMUST00000227221 751 ntBASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Rhox4bQ9JI43 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Rhox4bQ9JI43 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms