Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Gm1401-201ENSMUST00000122048 772 ntBASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Gm42670-201ENSMUST00000201816 1292 ntBASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Vps35Q9EQH3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Gm45167-201ENSMUST00000208007 322 ntBASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Vps35Q9EQH3 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Vps35Q9EQH3 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Gm4899-201ENSMUST00000178708 719 ntBASIC15.12■□□□□ 0.01
Vps35Q9EQH3 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms