Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chmp4bQ9D8B3 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chmp4bQ9D8B3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Chmp4bQ9D8B3 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp4bQ9D8B3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp4bQ9D8B3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp4bQ9D8B3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp4bQ9D8B3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC19.01■□□□□ 0.63
Chmp4bQ9D8B3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp4bQ9D8B3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp4bQ9D8B3 Gm43767-201ENSMUST00000198933 381 ntBASIC19.01■□□□□ 0.63
Chmp4bQ9D8B3 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC19.01■□□□□ 0.63
Chmp4bQ9D8B3 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.01■□□□□ 0.63
Chmp4bQ9D8B3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp4bQ9D8B3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp4bQ9D8B3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp4bQ9D8B3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp4bQ9D8B3 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp4bQ9D8B3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chmp4bQ9D8B3 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Chmp4bQ9D8B3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4bQ9D8B3 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4bQ9D8B3 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4bQ9D8B3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Chmp4bQ9D8B3 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4bQ9D8B3 Gm29361-201ENSMUST00000183323 2000 ntBASIC19■□□□□ 0.63
Chmp4bQ9D8B3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chmp4bQ9D8B3 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chmp4bQ9D8B3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19■□□□□ 0.63
Chmp4bQ9D8B3 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Chmp4bQ9D8B3 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4bQ9D8B3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chmp4bQ9D8B3 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4bQ9D8B3 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp4bQ9D8B3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chmp4bQ9D8B3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.99■□□□□ 0.63
Chmp4bQ9D8B3 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Gm45167-201ENSMUST00000208007 322 ntBASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp4bQ9D8B3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Gm6184-201ENSMUST00000120403 1261 ntBASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 CT010506.4-201ENSMUST00000225457 351 ntBASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 AC147366.1-201ENSMUST00000227671 852 ntBASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.97■□□□□ 0.63
Chmp4bQ9D8B3 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms