Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim13Q9CYB0 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Gm7977-201ENSMUST00000193787 748 ntBASIC13.98□□□□□ -0.17
Trim13Q9CYB0 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim13Q9CYB0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.97□□□□□ -0.17
Trim13Q9CYB0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trim13Q9CYB0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trim13Q9CYB0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms