Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Nipsnap3bQ9CQE1 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm14859-201ENSMUST00000117752 357 ntBASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm8655-201ENSMUST00000221159 852 ntBASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Nipsnap3bQ9CQE1 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm12895-201ENSMUST00000122214 226 ntBASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm27357-201ENSMUST00000183754 135 ntBASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nipsnap3bQ9CQE1 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm12644-201ENSMUST00000119935 606 ntBASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nipsnap3bQ9CQE1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.88□□□□□ -0.03
Nipsnap3bQ9CQE1 Gm15372-201ENSMUST00000120729 834 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms