Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim16Q99PP9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Gm4535-201ENSMUST00000182274 558 ntBASIC14.8□□□□□ -0.04
Trim16Q99PP9 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.8□□□□□ -0.04
Trim16Q99PP9 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Gm10355-201ENSMUST00000097146 517 ntBASIC14.8□□□□□ -0.04
Trim16Q99PP9 App-207ENSMUST00000227737 2827 ntBASIC14.8□□□□□ -0.04
Trim16Q99PP9 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim16Q99PP9 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.79□□□□□ -0.04
Trim16Q99PP9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Mir8098-201ENSMUST00000184011 137 ntBASIC14.79□□□□□ -0.04
Trim16Q99PP9 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Gm5864-201ENSMUST00000202263 970 ntBASIC14.79□□□□□ -0.04
Trim16Q99PP9 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim16Q99PP9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Gm13884-201ENSMUST00000118103 829 ntBASIC14.78□□□□□ -0.04
Trim16Q99PP9 Gm13418-201ENSMUST00000119097 944 ntBASIC14.78□□□□□ -0.04
Trim16Q99PP9 Gm11452-201ENSMUST00000122376 690 ntBASIC14.78□□□□□ -0.04
Trim16Q99PP9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Gm11780-201ENSMUST00000136880 516 ntBASIC14.78□□□□□ -0.04
Trim16Q99PP9 Gm28659-201ENSMUST00000188013 759 ntBASIC14.78□□□□□ -0.04
Trim16Q99PP9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Gm6376-201ENSMUST00000209407 580 ntBASIC14.78□□□□□ -0.04
Trim16Q99PP9 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.78□□□□□ -0.04
Trim16Q99PP9 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim16Q99PP9 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim16Q99PP9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Trim16Q99PP9 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.77□□□□□ -0.04
Trim16Q99PP9 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
Trim16Q99PP9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim16Q99PP9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Trim16Q99PP9 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim16Q99PP9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim16Q99PP9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trim16Q99PP9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trim16Q99PP9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms