Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcd2Q99JR8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcd2Q99JR8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd2Q99JR8 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd2Q99JR8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd2Q99JR8 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd2Q99JR8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.22■□□□□ 0.03
Smarcd2Q99JR8 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.22■□□□□ 0.03
Smarcd2Q99JR8 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd2Q99JR8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.22■□□□□ 0.03
Smarcd2Q99JR8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd2Q99JR8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Smarcd2Q99JR8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Smarcd2Q99JR8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Gm14767-201ENSMUST00000121559 586 ntBASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Gm43767-201ENSMUST00000198933 381 ntBASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smarcd2Q99JR8 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcd2Q99JR8 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcd2Q99JR8 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcd2Q99JR8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Smarcd2Q99JR8 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 AC140375.2-201ENSMUST00000225283 584 ntBASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smarcd2Q99JR8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Gm2423-201ENSMUST00000074863 733 ntBASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smarcd2Q99JR8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms