Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Gm18101-201ENSMUST00000215769 548 ntBASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Chmp1aQ921W0 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Chmp1aQ921W0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Chmp1aQ921W0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp1aQ921W0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.33□□□□□ -0.27
Chmp1aQ921W0 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Chmp1aQ921W0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Gm12620-201ENSMUST00000119791 1986 ntBASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Gm12612-201ENSMUST00000140182 1986 ntBASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Mir770-201ENSMUST00000103252 94 ntBASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.33□□□□□ -0.28
Chmp1aQ921W0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Chmp1aQ921W0 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chmp1aQ921W0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms