Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.82■□□□□ 0.6
HnrnpuQ8VEK3 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HnrnpuQ8VEK3 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HnrnpuQ8VEK3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HnrnpuQ8VEK3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HnrnpuQ8VEK3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Gm45605-201ENSMUST00000210265 4269 ntBASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Gm13036-201ENSMUST00000117799 748 ntBASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Gm43767-201ENSMUST00000198933 381 ntBASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Gm9449-201ENSMUST00000207265 1011 ntBASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HnrnpuQ8VEK3 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms