Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps4aQ8VEJ9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm4609-201ENSMUST00000106443 1002 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm5138-201ENSMUST00000113842 1002 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm15191-201ENSMUST00000117933 1000 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm8825-201ENSMUST00000182565 998 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm4518-201ENSMUST00000182638 718 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps4aQ8VEJ9 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Gm42670-201ENSMUST00000201816 1292 ntBASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps4aQ8VEJ9 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms