Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slf1Q8R3P9 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slf1Q8R3P9 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slf1Q8R3P9 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slf1Q8R3P9 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slf1Q8R3P9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Slf1Q8R3P9 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Slf1Q8R3P9 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slf1Q8R3P9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slf1Q8R3P9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.32■□□□□ 0.04
Slf1Q8R3P9 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slf1Q8R3P9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Slf1Q8R3P9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slf1Q8R3P9 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Slf1Q8R3P9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Slf1Q8R3P9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.32■□□□□ 0.04
Slf1Q8R3P9 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Gm38197-201ENSMUST00000192320 2122 ntBASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Mir770-201ENSMUST00000103252 94 ntBASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Slf1Q8R3P9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Gm45003-201ENSMUST00000205875 2158 ntBASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Slf1Q8R3P9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Slf1Q8R3P9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms