Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Sf3a1Q8K4Z5 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Sf3a1Q8K4Z5 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sf3a1Q8K4Z5 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Gm11779-201ENSMUST00000118541 368 ntBASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Gm8242-201ENSMUST00000193029 1420 ntBASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Sf3a1Q8K4Z5 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Sf3a1Q8K4Z5 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms