Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfwd3Q8CIK8 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Rfwd3Q8CIK8 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfwd3Q8CIK8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfwd3Q8CIK8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rfwd3Q8CIK8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Rfwd3Q8CIK8 AC157650.3-201ENSMUST00000225058 1476 ntBASIC14.24□□□□□ -0.13
Rfwd3Q8CIK8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfwd3Q8CIK8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rfwd3Q8CIK8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.24□□□□□ -0.13
Rfwd3Q8CIK8 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Gm27628-201ENSMUST00000184911 107 ntBASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rfwd3Q8CIK8 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Gm44771-201ENSMUST00000206975 626 ntBASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rfwd3Q8CIK8 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Gm45167-201ENSMUST00000208007 322 ntBASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Gm7787-201ENSMUST00000216858 688 ntBASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rfwd3Q8CIK8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms