Protein–RNA interactions for Protein: Q8CFI7

Polr2b, DNA-directed RNA polymerase II subunit RPB2, mousemouse

Known RBP Predictions only

Length 1,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2bQ8CFI7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.22■□□□□ 0.19
Polr2bQ8CFI7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 Gm10175-201ENSMUST00000086013 645 ntBASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Polr2bQ8CFI7 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Polr2bQ8CFI7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Polr2bQ8CFI7 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Polr2bQ8CFI7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Polr2bQ8CFI7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Polr2bQ8CFI7 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Polr2bQ8CFI7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Polr2bQ8CFI7 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Gm5177-201ENSMUST00000183092 997 ntBASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.19■□□□□ 0.18
Polr2bQ8CFI7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms