Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Alx1Q8C8B0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Alx1Q8C8B0 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Alx1Q8C8B0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Alx1Q8C8B0 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.58■□□□□ 0.41
Alx1Q8C8B0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Alx1Q8C8B0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Alx1Q8C8B0 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Alx1Q8C8B0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Alx1Q8C8B0 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.58■□□□□ 0.41
Alx1Q8C8B0 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.58■□□□□ 0.41
Alx1Q8C8B0 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Gm27494-201ENSMUST00000184735 189 ntBASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.58■□□□□ 0.4
Alx1Q8C8B0 AC124549.3-201ENSMUST00000225541 367 ntBASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Alx1Q8C8B0 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Gm27702-201ENSMUST00000184512 56 ntBASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Alx1Q8C8B0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Alx1Q8C8B0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms