Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc60Q8C4J0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc60Q8C4J0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc60Q8C4J0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc60Q8C4J0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ccdc60Q8C4J0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 AC164567.1-201ENSMUST00000219185 960 ntBASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ccdc60Q8C4J0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Gm12008-201ENSMUST00000117791 755 ntBASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 AC090659.1-201ENSMUST00000224334 768 ntBASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ccdc60Q8C4J0 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Gm17968-201ENSMUST00000194902 784 ntBASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ccdc60Q8C4J0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Gm5177-201ENSMUST00000183092 997 ntBASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Gm30437-201ENSMUST00000206086 1201 ntBASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ccdc60Q8C4J0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms