Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cdhr3Q8BL00 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Gm8655-201ENSMUST00000221159 852 ntBASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cdhr3Q8BL00 Celf4-206ENSMUST00000224553 1729 ntBASIC13.21□□□□□ -0.3
Cdhr3Q8BL00 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdhr3Q8BL00 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdhr3Q8BL00 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.21□□□□□ -0.3
Cdhr3Q8BL00 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdhr3Q8BL00 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.21□□□□□ -0.3
Cdhr3Q8BL00 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdhr3Q8BL00 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cdhr3Q8BL00 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Gm15358-201ENSMUST00000119249 520 ntBASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cdhr3Q8BL00 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Cdhr3Q8BL00 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms