Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Nucks1Q80XU3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Celf4-206ENSMUST00000224553 1729 ntBASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Nucks1Q80XU3 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.15■□□□□ 0.18
Nucks1Q80XU3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.15■□□□□ 0.18
Nucks1Q80XU3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.15■□□□□ 0.18
Nucks1Q80XU3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nucks1Q80XU3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.14■□□□□ 0.18
Nucks1Q80XU3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.14■□□□□ 0.18
Nucks1Q80XU3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Nucks1Q80XU3 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Gm10499-201ENSMUST00000174094 934 ntBASIC16.14■□□□□ 0.17
Nucks1Q80XU3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nucks1Q80XU3 Gm28033-201ENSMUST00000184224 96 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms