Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Mir449b-201ENSMUST00000104833 80 ntBASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Prpf38bQ80SY5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Rprl2-201ENSMUST00000157150 290 ntBASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Gm8825-201ENSMUST00000182565 998 ntBASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Gm17968-201ENSMUST00000194902 784 ntBASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Prpf38bQ80SY5 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Gm4899-201ENSMUST00000178708 719 ntBASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.78■□□□□ 0.12
Prpf38bQ80SY5 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.77■□□□□ 0.12
Prpf38bQ80SY5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf38bQ80SY5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.77■□□□□ 0.11
Prpf38bQ80SY5 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf38bQ80SY5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf38bQ80SY5 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf38bQ80SY5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf38bQ80SY5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.77■□□□□ 0.11
Prpf38bQ80SY5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf38bQ80SY5 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Prpf38bQ80SY5 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms